Intermolecular interactions in dihydrothymine derivatives form two-dimensional and three-dimensional networks

Crosbi ID216408
Bib IRB ID752205
Year2015
StatusObjavljeno
Typeprilog u časopisu
Subtypeizvorni znanstveni rad
AuthorsCetina, Mario ; Štefanić, Zoran ; Makarević, Janja ; Nura-Lama, Afërdita
JournalJournal of chemical crystallography
Volume45
Issue2
Pagesstr. 67-76
DOI10.1007/s10870-015-0567-1
ISSN1074-1542
EISSN1572-8854
Titles

en original Intermolecular interactions in dihydrothymine derivatives form two-dimensional and three-dimensional networks

Abstracts
en original

In this paper, inter- or intra-molecular induced oxazolidine ring opening of two bicyclic nucleosides during recrystallisation are presented. The structures of these two compounds, azide derivative 2 and -NHBz derivative 3, as well as bicyclic O-trityl derivative 1, have been determined by single crystal X-ray diffraction method. The aim of this work was to understand the influence of structural differences of dihydrothymines on their supramolecular assemblies. In the crystal structure of 1, which crystallized with one ethanol molecule in the asymmetric unit, O-H•••N and C-H•••O intermolecular hydrogen bonds form two-dimensional network. One C-H•••Pi interaction extends two-dimensional network into three-dimensional. Supramolecular structure of 2 is a three-dimensional network formed by N-H•••O, O-H•••O, C-H•••N and C-H•••O hydrogen bonds. Compound 3 crystallized with two independent molecules and two water molecules in the assymetric unit and displays the greatest number of intermolecular interactions. Interestingly, although N-H•••O, O-H•••N, O-H•••O and C-H•••O hydrogen bonds are formed, as well as two C-H•••Pi interactions, the result is only a two-dimensional network.

Keywords

en original bicyclic nucleosides; dihydropyrimidines; X-ray diffraction; supramolecular assembling; intermolecular interactions

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Citations
Cetina, Mario ; Štefanić, Zoran ; Makarević, Janja ; Nura-Lama, Afërdita
Intermolecular interactions in dihydrothymine derivatives form two-dimensional and three-dimensional networks // Journal of chemical crystallography, 45 (2015), 2; 67-76. doi: 10.1007/s10870-015-0567-1
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